What are the responsibilities and job description for the Biological Data Scientist position at University of California San Francisco?
The Fragiadakis (Data Science) and Combes (Disease to Biology) Labs, are seeking researchers in computational biology, bioinformatics, and data science to tackle current challenges in immunology. As a member of the lab, you will learn the analysis methods, as well as the conceptual and biological background, to analyze -omics datasets such as CyTOF, single-cell sequencing, and spatial transcriptomics. Once comfortable with these methods, under direct supervision, you will perform analyses to contribute to our understanding of immune state in our patient cohorts. You will integrate molecular data with clinical information to understand how the immune system impacts disease outcomes. You will be expected to document your analyses, present your progress and results, and participate in lab meetings.
We currently have several projects examining the relationship between immune state and health outcomes in a variety of UCSF patient cohorts, including infection, autoimmunity, and cancer. Our aim is to better understand how the immune system is wired and responds, to develop better disease diagnosis and treatments. As a member of our labs, you will contribute to the design of new experiments, help maintain our computational infrastructure, and track the flow of samples and information for large-scale studies. This position is jointly offered by Dr. Alexis Combes and Dr. Gabriela Fragiadakis, who both direct CoLab teams that often collaboratively pursue questions of immune state using single-cell methods, providing an environment of wet-lab and computational biologists with whom to work.
While this position requires some proficiency in programming and data analysis, candidates who are fast and eager learners, who can readily adopt new bioinformatics pipelines/workflows that have been developed in the lab and the field at-large and apply them to a series of diverse projects can be successful in this role. An aptitude for collaborative work and organization is required to excel in our environment of diverse researchers. The candidate will receive training in data analysis, as well as develop expertise and intuition in biology. This position is ideal for recent graduates and can serve as a stepping-stone for a graduate program or career in bioinformatics, computational biology, or data science.
The final salary and offer components are subject to additional approvals based on UC policy.
Your placement within the salary range is dependent on a number of factors including your work experience and internal equity within this position classification at UCSF. For positions that are represented by a labor union, placement within the salary range will be guided by the rules in the collective bargaining agreement.
The salary range for this position is $67,000 - $143,800 (Annual Rate).
To learn more about the benefits of working at UCSF, including total compensation, please visit: https://ucnet.universityofcalifornia.edu/compensation-and-benefits/index.html
Department Description
Required Qualifications
- Bachelor's degree in biological science, computational / programming (bioinformatics, computational biology, statistics, computer science, engineering), or related area and / or equivalent experience / training.
- Knowledge in a programming language such as R. Python, or similar programming languages.
- Knowledge in flow/mass cytometry and/or bulk/Single-cell RNAseq
- Basic knowledge of biology
- Interpersonal skills in order to work with both technical and non-technical personnel at various levels in the organization.
- Ability to communicate technical information in a clear and concise manner.
- Self motivated, able to learn quickly, meet deadlines and demonstrate problem solving skills.
Preferred Qualifications
- Basic knowledge of the execution and optimization of biological pipelines.
- Basic knowledge of databases.
- Basic project management skills.
- Basic knowledge of GitHub or equivalent
About UCSF
Pride Values
In addition to our PRIDE values, UCSF is committed to equity – both in how we deliver care as well as our workforce. We are committed to building a broadly diverse community, nurturing a culture that is welcoming and supportive, and engaging diverse ideas for the provision of culturally competent education, discovery, and patient care. Additional information about UCSF is available at diversity.ucsf.edu
Join us to find a rewarding career contributing to improving healthcare worldwide.
Equal Employment Opportunity
Organization
Job Code and Payroll Title
Job Category
Bargaining Unit
Employee Class
Percentage
Location
Campus
Work Style
Shift
Shift Length
Salary : $67,000 - $143,800